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Table of Pairwise Domain-Domain Interactions for the domain:
ubiquitin

Interacting Domains ↕CD ↕ Accession (External Link)Description ↕
Peptidase_C48pfam02902Ulp1 protease family, C-terminal catalytic domain. This domain contains the catalytic triad Cys-His-Asn.
CUEsmart00546CUE domain. CUE domains have been shown to bind ubiquitin. It has been suggested that CUE domains are related to pfam00627 and this has been confirmed by the structure of the domain. CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2.
UIMpfam02809Ubiquitin interaction motif. This motif is called the ubiquitin interaction motif. One of the proteins containing this motif is a receptor for poly-ubiquitination chains for the proteasome. This motif has a pattern of conservation characteristic of an alpha helix.
Peptidase_C12pfam01088Ubiquitin carboxyl-terminal hydrolase, family 1.
UBAcd00194Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.
UDGpfam03167Uracil DNA glycosylase superfamily.
BAGsmart00264BAG domain. Domain present in Hsp70 regulators.
GATpfam03127GAT domain. The GAT domain is responsible for binding of GGA proteins to several members of the ARF family including ARF1 and ARF3. The GAT domain stabilises membrane bound ARF1 in its GTP bound state, by interfering with GAP proteins.



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