Results for the gene: USH2A

Results for Proteins associated with the Gene: USH2A

USH2A

7399

O75445 NP_996816 NP_009054

NCBI

Known Diseases associated with this Protein:

RETINITIS PIGMENTOSA 39

RETINITIS PIGMENTOSA 39 (RP39)

RETINITIS PIGMENTOSA 39, INCLUDED

USHER SYNDROME 2A (USH2A)

USHER SYNDROME, TYPE IIA

			55 81 7 24 105

Tips:

The Domains on the Default View are decided by HMMER's search E-Value of the Protein against the Domain model.

Clicking a check box on the left will display or hide the corresponding domain(s).

To view the Protein page, either click on the protein links in the box to the left or the blue bar above the Protein's graphic.

Default View: LamGL - smart00560 LamNT - smart00136 Laminin_N - pfam00055 EGF_Lam - cd00055 Laminin_EGF - pfam00053 EGF_Lam - smart00180 fn3 - pfam00041 FN3 - smart00060 FN3 - cd00063 LamG - cd00110 LamG - smart00282 Laminin_G_1 - pfam00054 Laminin_G_2 - pfam02210	Swiss-Prot Protein: O75445 Default View:

Default View: LamGL - smart00560 LamNT - smart00136 Laminin_N - pfam00055 EGF_Lam - cd00055 Laminin_EGF - pfam00053 EGF_Lam - smart00180 fn3 - pfam00041 FN3 - smart00060 FN3 - cd00063 LamG - cd00110 LamG - smart00282 Laminin_G_1 - pfam00054 Laminin_G_2 - pfam02210	RefSeq Protein: NP_996816 Default View:

Default View: LamGL - smart00560 LamNT - smart00136 Laminin_N - pfam00055 EGF_Lam - cd00055 EGF_Lam - smart00180 Laminin_EGF - pfam00053 fn3 - pfam00041 FN3 - smart00060 FN3 - cd00063	RefSeq Protein: NP_009054 Default View:

Domains found on the Proteins

Protein ↕	Domain ↕	Domain Accession ↕	Start ↕	End ↕	E-Value ↕
NP_009054	EGF_Lam	cd00055	574	639	3.2e-13
NP_009054	EGF_Lam	cd00055	640	692	4.3e-16
NP_009054	EGF_Lam	cd00055	693	745	4.1e-13
NP_009054	EGF_Lam	cd00055	746	793	3.5e-15
NP_009054	EGF_Lam	cd00055	794	845	1.2e-16
NP_009054	EGF_Lam	cd00055	846	898	1.3e-15
NP_009054	EGF_Lam	cd00055	899	949	4.3e-17
NP_009054	EGF_Lam	cd00055	950	1000	4.8e-14
NP_009054	EGF_Lam	cd00055	1001	1051	2.1e-13
NP_009054	FN3	cd00063	1148	1238	6.3e-11
NP_009054	FN3	cd00063	1243	1357	1.4e-13
NP_009054	FN3	cd00063	1362	1462	2.2e-06
NP_009054	Laminin_N	pfam00055	284	516	2.4e-09
NP_009054	Laminin_EGF	pfam00053	518	572	0.00038
NP_009054	Laminin_EGF	pfam00053	575	638	0.00021
NP_009054	Laminin_EGF	pfam00053	641	691	3.5e-14
NP_009054	Laminin_EGF	pfam00053	694	744	1.8e-09
NP_009054	Laminin_EGF	pfam00053	747	792	7.3e-14
NP_009054	Laminin_EGF	pfam00053	795	844	3.7e-11
NP_009054	Laminin_EGF	pfam00053	847	897	6.4e-12
NP_009054	Laminin_EGF	pfam00053	900	948	1.1e-16
NP_009054	Laminin_EGF	pfam00053	951	999	5e-09
NP_009054	Laminin_EGF	pfam00053	1002	1050	2.9e-08
NP_009054	fn3	pfam00041	1058	1136	0.00014
NP_009054	fn3	pfam00041	1146	1230	2.3e-08
NP_009054	fn3	pfam00041	1243	1350	1.7e-07
NP_009054	fn3	pfam00041	1360	1455	0.00029
NP_009054	LamGL	smart00560	146	283	1.7e-50
NP_009054	LamNT	smart00136	274	516	6.8e-09
NP_009054	EGF_Lam	smart00180	518	572	0.00031
NP_009054	EGF_Lam	smart00180	575	638	2.4e-12
NP_009054	EGF_Lam	smart00180	641	691	2.2e-15
NP_009054	EGF_Lam	smart00180	694	744	4.1e-14
NP_009054	EGF_Lam	smart00180	747	792	4.7e-12
NP_009054	EGF_Lam	smart00180	795	844	1.6e-15
NP_009054	EGF_Lam	smart00180	847	897	3e-15
NP_009054	EGF_Lam	smart00180	900	948	3.8e-17
NP_009054	EGF_Lam	smart00180	951	999	2.6e-11
NP_009054	EGF_Lam	smart00180	1002	1050	2.9e-11
NP_009054	FN3	smart00060	1145	1229	1.3e-07
NP_009054	FN3	smart00060	1242	1348	2.2e-11
NP_009054	FN3	smart00060	1359	1453	5.1e-09

Please Cite: Peterson, T.A., Adadey, A., Santana-Cruz ,I., Sun, Y., Winder A, Kann, M.G., (2010) DMDM: Domain Mapping of Disease Mutations. Bioinformatics 26 (19), 2458-2459.

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