Home News About DMDM Database Statistics Research Publications Contact  

Results for the Protein: NP_542196
98985810

collagen alpha-1(XI) chain isoform B preproprotein [Homo sapiens]

Known Diseases associated with this Protein:
  FIBROCHONDROGENESIS
  MARSHALL/STICKLER SYNDROME
  STICKLER SYNDROME, TYPE II
5
4
5
4
0
Tips:
 The Domains on the Default View are decided by the Domain's E-Value.

 Clicking a check box will display or hide the correlated domain.

 To view the Gene page, either click on the link to the left or the blue bar above the Protein's graphic.



Default View:

TSPN - smart00210
LamG - cd00110
LamG - smart00282
Laminin_G_2 - pfam02210
Collagen - pfam01391
COLFI - smart00038
COLFI - pfam01410


RefSeq Protein: NP_542196
   Default View:






Domains found on the Protein

Domain ↕CD Accession ↕E-Value ↕Start ↕End ↕
Laminin_G_2pfam022101.2e-13105228
Collagenpfam013914.9e-11454520
Collagenpfam013914.7e-10539594
Collagenpfam013917.6e-15595654
Collagenpfam013914.8e-13655714
Collagenpfam013916.6e-12715774
Collagenpfam013911.6e-12775834
Collagenpfam013912.1e-12835894
Collagenpfam013911.9e-14895954
Collagenpfam013911.2e-129551014
Collagenpfam013911.1e-1210151074
Collagenpfam013911.8e-1310871146
Collagenpfam013916.9e-1211471206
Collagenpfam013911.3e-1212101269
Collagenpfam013914.7e-1212701329
Collagenpfam013916.6e-1213301389
Collagenpfam013916.1e-1413901449
Collagenpfam013912.6e-1214501509
Collagenpfam013918e-0915101554
COLFIpfam014102.1e-13716051816
TSPNsmart002101.8e-7038229
LamGsmart002821.2e-0697228
COLFIsmart000383.2e-12515881817

Table of Mutations found on the Protein

Source ↕Mut_ID ↕Class ↕HGVS ↕Disease ↕
dbSNPrs11164663 Polymorphismp.ASP46GLUN/A
dbSNPrs12731843 Polymorphismp.LYS276ASNN/A
dbSNPrs3753841 Polymorphismp.PRO1335LEUN/A
dbSNPrs1676486 Polymorphismp.SER1547PRON/A
OMIM120280.0009 Diseasep.GLY1042ARGFIBROCHONDROGENESIS
OMIM120280.0010 Diseasep.GLY796ARGFIBROCHONDROGENESIS
OMIM120280.0011 Diseasep.GLY1315TERFIBROCHONDROGENESIS
OMIM120280.0001 Diseasep.GLY97VALSTICKLER SYNDROME, TYPE II
OMIM120280.0003 Diseasep.GLY988VALMARSHALL/STICKLER SYNDROME



   |   1000 Hilltop Circle, Baltimore, MD 21250   |   Department of Biological Sciences   |   Phone: 410-455-2258